:py:mod:`medcat.datasets.patient_concept_stream`
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.. py:module:: medcat.datasets.patient_concept_stream
Module Contents
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Classes
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.. autoapisummary::
medcat.datasets.patient_concept_stream.PatientConceptStreamConfig
medcat.datasets.patient_concept_stream.PatientConceptStream
Attributes
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.. autoapisummary::
medcat.datasets.patient_concept_stream._CITATION
medcat.datasets.patient_concept_stream._DESCRIPTION
.. py:data:: _CITATION
:value: Multiline-String
.. raw:: html
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.. code-block:: python
"""@misc{kraljevic2020multidomain,
title={Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkit},
author={Zeljko Kraljevic and Thomas Searle and Anthony Shek and Lukasz Roguski and Kawsar Noor and Daniel Bean and Aurelie Mascio and Leilei Zhu and Amos A Folarin and Angus Roberts and Rebecca Bendayan and Mark P Richardson and Robert Stewart and Anoop D Shah and Wai Keong Wong and Zina Ibrahim and James T Teo and Richard JB Dobson},
year={2020},
eprint={2010.01165},
archivePrefix={arXiv},
primaryClass={cs.CL}
}
"""
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.. code-block:: python
"""Takes as input a pickled dict of pt2stream. The format should be:
{'patient_id': (concept_cui, concept_count_for_patient, timestamp_of_first_occurrence_for_patient), ...}
"""
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